Skin bacteria may predict vulnerability of amphibians to killer chytrid fungus

Bacterial communities that live on amphibian skin could provide vital clues to individual species’ vulnerability to the chytrid fungus Batrachochytrium dendrobatidis (Bd), which is currently decimating amphibian populations worldwide, according to a pioneering new genetic study led by international conservation charity ZSL (Zoological Society of London) and published in the journal Nature Communications.  

Swabbing a midwife toad

The research, conducted in partnership with the Spanish National Research Council (CSIC) and Imperial College London, used more than a decade of data collected from midwife toads (Alytes obstetricans) in the French and Spanish Pyrenees to investigate why certain populations of this species demonstrated a degree of resistance to Bd, while elsewhere the disease has contributed to catastrophic declines in similar animals. 

Previous studies indicate that the outcome of infection is linked to the virulence of the particular Bd strain, but more recent evidence suggests that bacteria living naturally on amphibian skin can actually provide protection from the fungus. 

Lead author Kieran Bates from Imperial College London and ZSL’s Institute of Zoology comments: “We were surprised to find that populations of midwife toads suffering severe Bd-driven declines all possessed very similar skin microbial communities, which were themselves distinct from those in populations proving more resistant to the chytrid pathogen."

“What these findings mean in practice is that skin microbes may play a more central role in dictating disease outcome for amphibians than was previously thought. Our next goal is to determine exactly how these skin microbes may be protecting the toads. This would open up exciting new possibilities with conservation applications that may protect this and other species from disease.”  

Senior co-author Dr Xavier Harrison from ZSL’s Institute of Zoology adds: “What’s really interesting about our findings is that there appears to be no obvious geographic relationship between individual toad populations and resistance to disease. Nor did we find evidence that declines in response to the presence of Bd were associated with unique genetic variants of the pathogen. This leaves us with the exciting possibility that skin microbes in Bd-resistant populations may actually be protecting the toads in question from the disease.”

Following this discovery, the team’s next priority is to determine exactly how skin microbes may be protecting the toads from chytrid. By shedding light on this amphibian-microbe relationship, it is hoped that they will open up exciting new approaches to the future conservation of this and other species.  

Find out more about amphibian chytridiomycosis 

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