Dr. Chris Yesson
Investigating the impact of trawling on the benthic habitats of Greenland
I am investigating the impact of the shrimp trawl fishery on the seabed of west greenland using benthic photography and bycatch observations to map, model the distribution of cold water coral species. See the project page benthic habitats of west greenland for more details.
Phyloclimatic modelling is a term to describe the integration of ecological niche models and phylogenetic reconstruction. Phyloclimatic models are essentially niche models for ancestral lineages and these models can be used in conjunction with palaeoclimate reconstructions and temporally calibrated phylogenies to estimate ancestral distribution patterns. I am interested in using these techniques to investigate the impact of historic climate change on evolutionary radiations.
I teach phylogenetics, species distribution modelling (aka ecological niche modelling / habitat suitability modelling), GIS and computer programming. My old teaching pages were lost in the website upgrade. I have migrated the most commonly requested practicals to my github training pages (https://github.com/cyesson/Training).
- Aug 2013-May 2014: Postdoctoral Researcher, Benthic habitats of the Greenland shelf, Institute of Zoology, London.
- Jan 2013-July 2013: Postdoctoral Researcher, Distribution of Large Brown Seaweeds in the UK, Natural History Museum, London
- June 2009-Dec 2012: Postdoctoral Researcher, EU FP7 Coralfish project, Institute of Zoology, London.
- 2004-2009: Associate Lecturer in Computing, Open University, London.
- 2008: Postdoctoral Researcher, Darwin Initiative project, Certification of Endangered Mexican Cacti, University of Reading, Berkshire.
- 2004-2008: PhD, Investigating Plant Diversity in Mediterranean Climates, University of Reading, Berkshire.
- 2004-5: Researcher, BBSRC project BiodiversityWorld, University of Reading, Berkshire.
- 2001-2: MSc, Advanced Methods in Taxonomy and Biodiversity, Natural History Museum & Imperial College, London.
- 1996-2001: Management Consultant, The pH Group Ltd, London.
- 1993-1996: BSc, Pure Maths with Russian, Queen Mary College, London.
Selected Publications ( Citation Info )
Wright EP, Kemp K, Rogers AD, Yesson C (2014) Genetic structure of the tall sea pen Funiculina quadrangularis in NW Scottish sea lochs. Marine Ecology. (doi: 10.1111/maec.12174)
Brodie J, Williamson CJ, Smale DA, Kamenos NA, Mieszkowska N, Santos R, Cunliffe M, Steinke M, Yesson C, et al. (2014) The future of the northeast Atlantic benthic flora in a high CO 2 world. Ecology & Evolution 4:2787–2798
Ciotir C, Yesson C & Freeland J (2013) The evolutionary history and conservation value of disjunct Bartonia paniculata subsp. paniculata (Branched Bartonia) populations in Canada. Botany. 91:605-613
Bijma J, Pörtner HO, Yesson C & Rogers AD (2013) Climate change and the oceans – What does the future hold? Marine Pollution Bulletin. 74:495-505
Dolan E, Tyler PA, Yesson C & Rogers AD (2013) Phylogeny and systematics of deep-sea sea pens (Anthozoa: Octocorallia: Pennatulacea). Molecular phylogenetics and evolution. 69: 610-618
Rengstorf AM, Yesson C, Brown C, Grehan AJ (2013) High-resolution habitat suitability modelling can improve conservation of vulnerable marine ecosystems in the deep sea. Journal of Biogeography. 40:1702-1714
Taylor ML, Yesson C, Agnew DJ, Mitchell RE, Rogers AD (2013) Using fisheries by-catch data to predict octocoral habitat suitability around South Georgia. Journal of Biogeography. 40:1688-1701
Yesson C, Taylor ML, Tittensor DP, Davies AJ, Guinotte J, Baco A, Black J, Hall-Spencer JM & Rogers AD (2012) Global habitat suitability of cold-water octocorals. Journal of Biogeography. 39: 1278-1292. (Abstract , Data )
Rengstorf AM, Yesson C, Brown C & Grehan AJ (2012) Towards high resolution habitat suitability modelling of vulnerable marine ecosystems in the deep-sea: resolving terrain attribute dependencies. Marine Geodesy. 35: 343-361.
Töpel M, Antonelli A, Yesson C & Eriksen B (2012) Past Climate Change and Plant Evolution in Western North America: A Case Study in Rosaceae. PLoS ONE. 7: e50358.
Sheppard CRC et al. (2012) Reefs and islands of the Chagos Archipelago, Indian Ocean: why it is the world's largest no-take marine protected area. Aquatic Conservation: Marine and Freshwater Ecosystems. 22: 232-261
Moura CJ, Cunha MR, Porteiro FM, Yesson C & Rogers AD (2012) Evolution of Nemertesia hydroids (Cnidaria: Hydrozoa, Plumulariidae) from the shallow and deep waters of the NE Atlantic and western Mediterranean. Zoologica Scripta. 41: 79-96
Bárcenas RT, Yesson C & Hawkins JA (2011) Molecular systematics of the Cactaceae. Cladistics. 27: 470-489 (abstract)
Yesson C, Bárcenas RT, Hernández HM, De La Luz Ruiz-Maqueda M, Prado A, Rodríguez VM & Hawkins JA (2011) DNA barcodes for Mexican Cactaceae, plants under pressure from wild collecting. Molecular Ecology Resources. 11: 775-783
Yesson C, Clark MR, Taylor ML & Rogers AD (2011) The global distribution of seamounts based on 30-second bathymetry data. Deep Sea Research Part I: Oceanographic Research Papers. 58(4): 442-453. (data)
Warren B, Bakker F, Bellstedt D, Bytebier B, ClaSZen-Bockhoff R, Dreyer L, Edwards D, Forest F, Galley C, Hardy C, Linder HP, Muasya AM, Mummenhoff K, Oberlander K, Quint M, Richardson J, Savolainen V, Schrire B, van der Niet T, Verboom GA, Yesson C & Hawkins J (2011) Consistent phenological shifts in the making of a biodiversity hotspot: the Cape flora. BMC Evolutionary Biology. 11:39 (article)
Yesson C & Culham A (2011) Chapter 12. Biogeography of Cyclamen: an application of phyloclimatic modelling. In Hodkinson T, Jones M, Waldren S & Parnell J (ed.)Climate change, ecology and systematics. Cambridge University Press. pp 265-279.
Prado A, Hawkins JA, Yesson C & Bárcenas RT (2010) Multiple diversity measures to identify complementary conservation areas for the Baja California peninsular cacti.Biological Conservation, 143: 1510-1520 (abstract)
Yesson C, Toomey NH & Culham A (2009) Cyclamen: time, sea and speciation biogeography using a temporally calibrated phylogeny Journal of Biogeography 36:1234-1252. (abstract)
Yesson C, Brewer PW, Sutton T, Caithness N, Pahwa JS, Burgess M, Gray WA, White RJ, Jones AC, Bisby FA and Culham A (2007) How global is the global biodiversity information facility? PLoS ONE 2(11): e1124 (pdf)
Yesson C & Culham A (2006) A phyloclimatic study of Cyclamen. BMC Evolutionary Biology 6: 72(23pp) (pdf)
Yesson C & Culham A (2006) Phyloclimatic Modelling: Combining Phylogenetics and Bioclimatic Modelling. Systematic Biology 55: 785-802 (abstract)
Yesson C, Russell SJ, Parrish T, Dalling JW & Garwood NC (2004) Phylogenetic framework for Trema (Celtidaceae). Plant Systematics and Evolution 248: 85-109 (abstract)
- 2009: The Linnean Society’s Irene Manton Prize for the best thesis in botany.
- 2006: A BMC biology prize for Yesson & Culham (2006) A phyloclimatic study of Cyclamen.
- 1996: Institute of Mathematics and its Applications Prize for outstanding achievement in a Bsc.
- Contributor to the open source niche modelling project openModeller
- Implementation of ENFA niche modelling algorithm
- Co-author (with Tim Sutton) of the Envelope Score niche modelling algorithm for openModeller (used by the GBIF data portal)
- Contributor to the open source GIS project GDAL ( Geospatial Data Abstraction Library )
- Implmentation of TPI, TRI and roughness algorithms in the gdaldem application
- Python/GDAL raster calculator (gdal_calc.py)
- My Slideshare Page
- My Teaching Materials
- Youtube videos from Azores workshop on species distribution modelling
- EU FP7 Coralfish project
- Certification of Endangered Mexican Cacti
- The Catalogue of Life Project
- openModeller – open source niche modelling software project
- Quantum GIS – open source GIS software
- Geospatial Data Abstraction Library – open source GIS software